Objective To identify the metabolite levels on paramedian thalamus in patients with COPD by proton magnetic resonance spectroscopy (1H-MRS). Methods Thirty-two patients with COPD in our hospital from February 2012 to January 2015 were randomly selected and 30 normal controls were also selected. 1H-MRS was used to detect N-acetyl aspartate (NAA), choline complex (Cho) and creatine complex (Cr) in paramedian thalamus of all the subjects. The ratios of NAA/Cr and Cho/Cr were determined. Results The NAA/Cr ratio in the bilateral paramedian thalamus of the patients with COPD was significantly lower than that in the normal controls (P < 0.05). The Cho/Cr ratio in the patients with COPD was higher than that in the normal controls, the difference was statistically significant (P < 0.05). Conclusions Metabolisms of neurons in paramedian thalamus are abnormal in patients with COPD.